BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D07LP1|AL425115
(960 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1596 1840 0.0
>3x_Contig1596
Length = 11686
Score = 1840 bits (927), Expect = 0.0
Identities = 957/963 (99%), Gaps = 4/963 (0%)
Strand = Plus / Plus
Query: 1 atctctaaatgccagttactttgtgtctgtagagtagtttccaggttgaaagttgaatat 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 352 atctctaaatgccagttactttgtgtctg-agagtagtttccaggttgaaagttgaatat 410
Query: 61 ggaaaaaaataaaactgaaaaatgtgaatgaataagtwaacaaataaacagcaaatgatt 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 411 ggaaaaaaataaaactgaaaaatgtgaatgaataagtaaacaaataaacagcaaatgatt 470
Query: 121 gctaaatcattgccttagcaagcttgaactataccagtacttgagcttaggagtaagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gctaaatcattgccttagcaagcttgaactataccagtacttgagcttaggagtaagctg 530
Query: 181 aataaggaactaggtatacttgcttagccttttaaaaaaaaaaagcgtgaaagagaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aataaggaactaggtatacttgcttagccttttaaaaaaaaaaagcgtgaaagagaagaa 590
Query: 241 cctcttagcacagtttccggcttgcttaatatgtcttcgaacggcaaacaacagggaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cctcttagcacagtttccggcttgcttaatatgtcttcgaacggcaaacaacagggaaac 650
Query: 301 aaggcaggcgatgcagctgggggagcgtcaggagccacggctcccggtgcaggcggaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaggcaggcgatgcagctgggggagcgtcaggagccacggctcccggtgcaggcggaagt 710
Query: 361 agtggcaatggaaatagtagtgcggccggaaatgctagcgctaatgccaatgctggcggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 agtggcaatggaaatagtagtgcggccggaaatgctagcgctaatgccaatgctggcggt 770
Query: 421 agcggtgccagtgggaatgcaccggcagcttctaaaccggggttttcagcgtcagatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 agcggtgccagtgggaatgcaccggcagcttctaaaccggggttttcagcgtcagatttg 830
Query: 481 aaccgcatcgttttggaatatttgaataagaaggggtatcacagaacggaacagatgctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aaccgcatcgttttggaatatttgaataagaaggggtatcacagaacggaacagatgctt 890
Query: 541 cgtgctgaatcgtcacgtactttgacgcctccaaataaaaacgctgctgcttctaacaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 cgtgctgaatcgtcacgtactttgacgcctccaaataaaaacgctgctgcttctaacaca 950
Query: 601 atccctgcctcgtctgcatcagccactgcgattacaggaagtactaccactgcaaaacct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 atccctgcctcgtctgcatcagccactgcgattacaggaagtactaccactgcaaaacct 1010
Query: 661 gtttcaaatccttcgatgcccttgaaaagagataacaacggccaattgataaaaccgcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 gtttcaaatccttcgatgcccttgaaaagagataacaacggccaattgataaaaccgcaa 1070
Query: 721 caggtgacacccttgcactattttagagcttactcaatgttgaaaaattggatcgattcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 caggtgacacccttgcactattttagagcttactcaatgttgaaaaattggatcgattcg 1130
Query: 781 tctttagaattgtacaaacctgagctatcacgtatcatatacccgattttcatttacgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 tctttagaattgtacaaacctgagctatcacgtatcatatacccgattttcatttacgtt 1190
Query: 841 tttttacagttggtcatcaagga-cccttacaagcgagaagattctttgacaagtattct 899
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1191 tttttacagttggtcatcaaggaccccttacaagcgagaagattctttgacaagtattct 1250
Query: 900 gtcgattacaaagcccttcatggatcagaaa-twaccgattattcagtgtc-actcagta 957
||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 1251 gtcgattacaaagcccttcatggatcagaaattaaccgattattcagtgtcaactcagta 1310
Query: 958 gat 960
|||
Sbjct: 1311 gat 1313
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,826
Number of Sequences: 1807
Number of extensions: 11826
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)